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- 1From: Journal of Biomedical Semantics. (Vol. 3, Issue 1) Peer-ReviewedBackground A vaccine is a processed material that if administered, is able to stimulate an adaptive immune response to prevent or ameliorate a disease. A vaccination process may protect the host against subsequent...
- 2From: Journal of Biomedical Semantics. (Vol. 3, Issue 1) Peer-ReviewedVaccines and drugs have contributed to dramatic improvements in public health worldwide. Over the last decade, there have been efforts in developing biomedical ontologies that represent various areas associated with...
- 3From: Journal of Biomedical Semantics. (Vol. 3, Issue 1) Peer-ReviewedMotivation In this paper we demonstrate the usage of RIO; a framework for detecting syntactic regularities using cluster analysis of the entities in the signature of an ontology. Quality assurance in ontologies is...
- 4From: Journal of Biomedical Semantics. (Vol. 3, Issue 1) Peer-ReviewedBackground Fever is one of the most common adverse events of vaccines. The detailed mechanisms of fever and vaccine-associated gene interaction networks are not fully understood. In the present study, we employed a...
- 5From: Journal of Biomedical Semantics. (Vol. 3, Issue 1) Peer-ReviewedBackground The U.S. FDA/CDC Vaccine Adverse Event Reporting System (VAERS) provides a valuable data source for post-vaccination adverse event analyses. The structured data in the system has been widely used, but the...
- 6From: Journal of Biomedical Semantics. (Vol. 3, Issue 1) Peer-ReviewedBackground The ability to conduct genome-wide association studies (GWAS) has enabled new exploration of how genetic variations contribute to health and disease etiology. However, historically GWAS have been limited...
- 7From: Journal of Biomedical Semantics. (Vol. 3, Issue 1) Peer-ReviewedBackground Identification of drug-drug and drug-diseases interactions can pose a difficult problem to cope with, as the increasingly large number of available drugs coupled with the ongoing research activities in the...
- 8From: Journal of Biomedical Semantics. (Vol. 3, Issue 1) Peer-ReviewedAbstract The sheer amount of information about potential adverse drug events publishedin medical case reports pose major challenges for drug safety experts toperform timely monitoring. Efficient strategies for...
- 9From: Journal of Biomedical Semantics. (Vol. 3, Issue 1) Peer-ReviewedBackground With the development of high throughput methods of gene analyses, there is a growing need for mining tools to retrieve relevant articles in PubMed. As PubMed grows, literature searches become more complex...
- 10From: Journal of Biomedical Semantics. (Vol. 3, Issue 1) Peer-ReviewedBackground Clinical phenotypes and disease-risk stratification are most often determined through the direct observations of clinicians in conjunction with published standards and guidelines, where the clinical expert...
- 11From: Journal of Biomedical Semantics. (Vol. 3, Issue 1) Peer-ReviewedBackground Transfusion and clinical laboratory services are high-volume activities involving complicated workflows across both ambulatory and inpatient environments. As a result, there are many opportunities for...
- 12From: Journal of Biomedical Semantics. (Vol. 3, Issue 1) Peer-ReviewedBackground As the "omics" revolution unfolds, the growth in data quantity and diversity is bringing about the need for pioneering bioinformatics software, capable of significantly improving the research workflow. To...
- 13From: Journal of Biomedical Semantics. (Vol. 3, Issue 1) Peer-ReviewedBackground Genome sequencing of many eukaryotic pathogens and the volume of data available on public resources have created a clear requirement for a consistent vocabulary to describe the range of developmental forms...